Package: ScatterDensity 0.0.3
ScatterDensity: Density Estimation and Visualization of 2D Scatter Plots
The user has the option to utilize the two-dimensional density estimation techniques called smoothed density published by Eilers and Goeman (2004) <doi:10.1093/bioinformatics/btg454>, and pareto density which was evaluated for univariate data by Thrun, Gehlert and Ultsch, 2020 <doi:10.1371/journal.pone.0238835>. Moreover, it provides visualizations of the density estimation in the form of two-dimensional scatter plots in which the points are color-coded based on increasing density. Colors are defined by the one-dimensional clustering technique called 1D distribution cluster algorithm (DDCAL) published by Lux and Rinderle-Ma (2023) <doi:10.1007/s00357-022-09428-6>.
Authors:
ScatterDensity_0.0.3.tar.gz
ScatterDensity_0.0.3.zip(r-4.5)ScatterDensity_0.0.3.zip(r-4.4)ScatterDensity_0.0.3.zip(r-4.3)
ScatterDensity_0.0.3.tgz(r-4.4-x86_64)ScatterDensity_0.0.3.tgz(r-4.4-arm64)ScatterDensity_0.0.3.tgz(r-4.3-x86_64)ScatterDensity_0.0.3.tgz(r-4.3-arm64)
ScatterDensity_0.0.3.tar.gz(r-4.5-noble)ScatterDensity_0.0.3.tar.gz(r-4.4-noble)
ScatterDensity_0.0.3.tgz(r-4.4-emscripten)ScatterDensity_0.0.3.tgz(r-4.3-emscripten)
ScatterDensity.pdf |ScatterDensity.html✨
ScatterDensity/json (API)
| # Install 'ScatterDensity' in R: |
| install.packages('ScatterDensity', repos = c('https://mthrun.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mthrun/scatterdensity/issues
Last updated 1 years agofrom:b568205a9a. Checks:OK: 9. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 24 2024 |
| R-4.5-win-x86_64 | OK | Oct 24 2024 |
| R-4.5-linux-x86_64 | OK | Oct 24 2024 |
| R-4.4-win-x86_64 | OK | Oct 24 2024 |
| R-4.4-mac-x86_64 | OK | Oct 24 2024 |
| R-4.4-mac-aarch64 | OK | Oct 24 2024 |
| R-4.3-win-x86_64 | OK | Oct 24 2024 |
| R-4.3-mac-x86_64 | OK | Oct 24 2024 |
| R-4.3-mac-aarch64 | OK | Oct 24 2024 |
Exports:DDCALDensityScatter.DDCALInteractiveGateInteractiveSequentialGatesPDEscatterPointsInPolygonPolygonGateSmoothedDensitiesXY
Dependencies:pracmaRcppRcppArmadillo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Density Estimation and Visualization of 2D Scatter Plots | ScatterDensity-package ScatterDensity |
| Density Distribution Cluster Algorithm of [Lux and Rinderle-Ma, 2023]. | DDCAL |
| Scatter density plot [Brinkmann et al., 2023] | DensityScatter.DDCAL |
| 2D data points in Pareto Sphere | inPSphere2D |
| Interactive manual gating of scatter pplots | InteractiveGate |
| Interactive Sequential Gates | InteractiveSequentialGates |
| Scatter Density Plot | PDEscatter |
| PointsInPolygon | PointsInPolygon |
| PolygonGate | PolygonGate |
| Smoothed Densities X with Y | SmoothedDensitiesXY |
